Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR46124.1 | SFR52033.1 | SAMN05216203_0508 | SAMN05216203_1092 | Methyltransferase domain-containing protein. | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.603 |
SFR46124.1 | SFR82730.1 | SAMN05216203_0508 | SAMN05216203_3331 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.490 |
SFR46124.1 | ftsB | SAMN05216203_0508 | SAMN05216203_0027 | Methyltransferase domain-containing protein. | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.668 |
SFR46124.1 | recO | SAMN05216203_0508 | SAMN05216203_2763 | Methyltransferase domain-containing protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.482 |
SFR49226.1 | SFR82730.1 | SAMN05216203_0856 | SAMN05216203_3331 | Hypothetical protein. | Hypothetical protein. | 0.478 |
SFR52033.1 | SFR46124.1 | SAMN05216203_1092 | SAMN05216203_0508 | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | Methyltransferase domain-containing protein. | 0.603 |
SFR52033.1 | SFR82730.1 | SAMN05216203_1092 | SAMN05216203_3331 | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | Hypothetical protein. | 0.566 |
SFR52033.1 | ftsB | SAMN05216203_1092 | SAMN05216203_0027 | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.695 |
SFR59191.1 | SFR82730.1 | SAMN05216203_1638 | SAMN05216203_3331 | Hypothetical protein; Belongs to the UPF0125 (RnfH) family. | Hypothetical protein. | 0.441 |
SFR59873.1 | SFR82730.1 | SAMN05216203_1682 | SAMN05216203_3331 | Ubiquinone biosynthesis protein UbiJ. | Hypothetical protein. | 0.475 |
SFR82730.1 | SFR46124.1 | SAMN05216203_3331 | SAMN05216203_0508 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.490 |
SFR82730.1 | SFR49226.1 | SAMN05216203_3331 | SAMN05216203_0856 | Hypothetical protein. | Hypothetical protein. | 0.478 |
SFR82730.1 | SFR52033.1 | SAMN05216203_3331 | SAMN05216203_1092 | Hypothetical protein. | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.566 |
SFR82730.1 | SFR59191.1 | SAMN05216203_3331 | SAMN05216203_1638 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0125 (RnfH) family. | 0.441 |
SFR82730.1 | SFR59873.1 | SAMN05216203_3331 | SAMN05216203_1682 | Hypothetical protein. | Ubiquinone biosynthesis protein UbiJ. | 0.475 |
SFR82730.1 | SFR82739.1 | SAMN05216203_3331 | SAMN05216203_3332 | Hypothetical protein. | Magnesium chelatase family protein. | 0.605 |
SFR82730.1 | astE | SAMN05216203_3331 | SAMN05216203_1547 | Hypothetical protein. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.440 |
SFR82730.1 | ftsB | SAMN05216203_3331 | SAMN05216203_0027 | Hypothetical protein. | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.534 |
SFR82730.1 | recO | SAMN05216203_3331 | SAMN05216203_2763 | Hypothetical protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.572 |
SFR82730.1 | trmB | SAMN05216203_3331 | SAMN05216203_3333 | Hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.451 |
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