STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR83086.1Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. (266 aa)    
Predicted Functional Partners:
SFR44240.1
Dimethylhistidine N-methyltransferase.
 
 
 0.666
SFR83056.1
Lipase chaperone protein.
       0.570
lnt-2
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
       0.570
SFR83076.1
Hypothetical protein.
       0.570
SFR80886.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.500
SFR75865.1
Serine/threonine protein phosphatase PrpC.
 
 
 0.494
SFR47728.1
Putative ABC transport system ATP-binding protein.
  
    0.453
SFR44630.1
iron(II)-dependent oxidoreductase.
  
     0.443
SFR60065.1
Lysine N6-hydroxylase.
  
  
 0.425
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.418
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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