STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR85983.1Glutamate synthase (NADPH/NADH) small chain. (472 aa)    
Predicted Functional Partners:
SFR60690.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.999
SFR77056.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
 
 0.999
SFR85967.1
Glutamate synthase (NADPH/NADH) large chain.
 0.999
SFR72984.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.994
SFR64686.1
Glutamate--putrescine ligase; Belongs to the glutamine synthetase family.
  
 
 0.971
SFR64987.1
Glutamine synthetase.
  
 
 0.971
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.971
SFR49628.1
Glutamate dehydrogenase.
     
 0.969
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.968
SFR41639.1
Aspartate aminotransferase.
  
 
 0.966
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.