STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ42359.1KEGG: cyc:PCC7424_1174 hypothetical protein; SPTR: Putative uncharacterized protein. (363 aa)    
Predicted Functional Partners:
AFZ44438.1
KEGG: cyt:cce_0205 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.739
AFZ44154.1
PFAM: Late competence development protein ComFB; InterPro IPR019657; KEGG: npu:Npun_R6015 response regulator receiver protein; PFAM: Late competence development protein ComFB; SPTR: Response regulator receiver domain protein (CheY).
  
     0.702
AFZ45581.1
KEGG: cyc:PCC7424_3802 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.699
AFZ42618.1
KEGG: npu:Npun_R5196 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.667
AFZ44730.1
KEGG: syn:slr1770 hypothetical protein; SPTR: Slr1770 protein.
  
     0.667
AFZ43974.1
PFAM: Ycf66 protein N-terminus; InterPro IPR010004; KEGG: ter:Tery_3901 hypothetical protein; PFAM: Ycf66 family protein; SPTR: Putative uncharacterized protein.
  
     0.666
AFZ43229.1
PFAM: Transglutaminase-like superfamily; COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: cyh:Cyan8802_3747 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase-like superfamily protein.
  
     0.659
AFZ42816.1
KEGG: cyh:Cyan8802_4008 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.648
AFZ43043.1
KEGG: cyc:PCC7424_1178 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.647
AFZ45338.1
PFAM: Predicted periplasmic protein (DUF2233); KEGG: cyc:PCC7424_0303 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.644
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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