STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ42600.1KEGG: cyh:Cyan8802_0572 hypothetical protein; SPTR: Putative uncharacterized protein. (179 aa)    
Predicted Functional Partners:
AFZ43118.1
KEGG: syp:SYNPCC7002_A2448 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.739
AFZ45908.1
KEGG: npu:Npun_R5928 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.715
AFZ42599.1
PFAM: Protein kinase domain; COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441:IPR008271:IPR000719:IPR017442:IPR 020635:IPR002290; KEGG: cyc:PCC7424_4513 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase.
       0.707
AFZ45093.1
KEGG: cyc:PCC7424_4211 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.698
AFZ44825.1
KEGG: mar:MAE_57850 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.682
AFZ44619.1
Fibrillin; PFAM: PAP_fibrillin; KEGG: cyt:cce_3570 fibrillin; SPTR: PAP fibrillin family protein.
  
     0.681
AFZ43219.1
KEGG: cyt:cce_3445 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.677
AFZ44382.1
KEGG: cyc:PCC7424_4485 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.668
AFZ42292.1
KEGG: cyc:PCC7424_2365 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.661
AFZ43409.1
KEGG: cyt:cce_3618 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.655
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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