STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ42667.1PFAM: HNH endonuclease; COGs: COG1403 Restriction endonuclease; InterPro IPR002711:IPR003615; KEGG: cyh:Cyan8802_2838 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease. (166 aa)    
Predicted Functional Partners:
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.545
AFZ42666.1
Hypothetical protein; PFAM: DHH family; COGs: COG0618 Exopolyphosphatase-related protein; KEGG: cyc:PCC7424_4087 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.506
AFZ42664.1
Phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA; COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR004449:IPR013078; KEGG: cyt:cce_1479 putative phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; SPTR: Putative Phosphohistidine phosphatase SixA; TIGRFAM: phosphohistidine phosphatase SixA.
 
     0.452
AFZ44522.1
PFAM: HNH endonuclease; InterPro IPR002711:IPR003615; KEGG: ter:Tery_4021 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease domain protein.
  
     0.403
AFZ42669.1
COGs: COG5305 membrane protein; KEGG: naz:Aazo_4315 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.401
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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