STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ42721.1PFAM: Gas vesicle synthesis protein GvpL/GvpF; InterPro IPR009430; KEGG: npu:Npun_F2158 gas vesicle synthesis protein GvpW; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: Gas vesicle synthesis protein GvpW. (223 aa)    
Predicted Functional Partners:
AFZ42718.1
Gas vesicle protein GvpN; PFAM: AAA domain (dynein-related subfamily); TIGRFAM: gas vesicle protein GvpN; COGs: COG0714 MoxR-like ATPase; InterPro IPR013462:IPR011704:IPR003593; KEGG: npu:Npun_F2153 gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: Gas vesicle protein GvpN; TIGRFAM: gas vesicle protein GvpN.
 
   
 0.851
AFZ42713.1
PFAM: Gas vesicle synthesis protein GvpL/GvpF; InterPro IPR009430; KEGG: ava:Ava_0073 gas vesicle synthesis GvpLGvpF; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: Gas vesicle synthesis GvpLGvpF.
 
   
 0.849
AFZ42714.1
PFAM: Gas vesicle protein K; Gas vesicle protein; InterPro IPR007805:IPR000638; KEGG: npu:Npun_F2155 gas vesicle protein GvpK; PFAM: Gas vesicle K; gas vesicle protein GVPa; SPTR: Gas vesicle protein GvpK.
 
   
 0.849
AFZ42712.1
PFAM: Gas vesicle protein G; KEGG: ana:all2247 gas vesicle protein; SPTR: Gas vesicle G.
 
   
 0.845
gvpA
Gas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.839
AFZ42717.1
Gas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.814
AFZ43478.1
Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR016300:IPR003348; KEGG: mar:MAE_37710 ATPase GET3; PRIAM: Arsenite-transporting ATPase; SPTR: ATPase GET3; TIGRFAM: arsenite-activated ATPase ArsA; TC 3.A.4.1.1.
 
     0.758
AFZ42719.1
Gas vesicle protein GvpC; InterPro IPR002003; KEGG: mar:MAE_37620 gas vesicle structural protein; SPTR: Gas vesicle protein GVPc; TIGRFAM: gas vesicle protein GvpC.
 
     0.624
AFZ43723.1
Adenosinetriphosphatase; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003960:IPR003593:IPR003959; KEGG: mar:MAE_37720 cell division protein; PFAM: AAA ATPase central domain protein; PRIAM: Adenosinetriphosphatase; SMART: AAA ATPase; SPTR: Similar to tr|Q3MH42|Q3MH42_ANAVT AAA ATPase.
 
     0.595
AFZ42722.1
KEGG: dge:Dgeo_0271 primosomal protein N'; SPTR: Extracellular solute-binding protein family 1.
       0.570
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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