STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ42731.1KEGG: syp:SYNPCC7002_A1493 hypothetical protein; SPTR: Putative uncharacterized protein. (350 aa)    
Predicted Functional Partners:
AFZ42730.1
KEGG: ter:Tery_4318 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.828
AFZ42461.1
Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: npu:Npun_R5959 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.735
AFZ43048.1
PFAM: Protein of unknown function (DUF2811); KEGG: cyh:Cyan8802_2153 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.707
AFZ44118.1
KEGG: naz:Aazo_4750 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.704
AFZ42729.1
Hypothetical protein.
       0.703
AFZ45792.1
KEGG: syn:slr1601 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.687
AFZ45465.1
Tetratricopeptide TPR_2; InterPro IPR019734:IPR013026; KEGG: ter:Tery_2395 tetratricopeptide TPR_2; SPTR: Tetratricopeptide repeat domain protein.
  
     0.631
AFZ42733.1
Heat shock protein DnaJ domain protein; PFAM: Protein of unknown function (DUF3353); InterPro IPR001623; KEGG: cyc:PCC7424_1533 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SPTR: Heat shock protein DnaJ domain protein.
 
     0.624
AFZ43666.1
KEGG: mar:MAE_42090 hypothetical protein; SPTR: Genome sequencing data, contig C298.
  
     0.618
AFZ44752.1
PFAM: Protein of unknown function (DUF3318); KEGG: cyh:Cyan8802_0455 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.608
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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