STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ42765.1PFAM: FAD binding domain; Oxidoreductase NAD-binding domain; CpcD/allophycocyanin linker domain; COGs: COG0369 Sulfite reductase alpha subunit (flavoprotein); InterProIPR001709:IPR017927:IPR008213:IPR012146:IPR 003097:IPR001433; KEGG: cyc:PCC7424_5201 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; CpcD phycobilisome linker domain protein; FAD-binding domain protein; SPTR: Ferredoxin--NADP reductase. (401 aa)    
Predicted Functional Partners:
AFZ45067.1
Ferredoxin (2Fe-2S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions; Belongs to the 2Fe2S plant-type ferredoxin family.
  
 
 
 0.872
AFZ43232.1
Ferredoxin (2Fe-2S); PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S]; COGs: COG0633 Ferredoxin; InterPro IPR006058:IPR010241:IPR001041; KEGG: cyn:Cyan7425_3903 ferredoxin (2Fe-2S); PFAM: ferredoxin; SPTR: Ferredoxin (2Fe-2S) subfamily; TIGRFAM: ferredoxin [2Fe-2S].
  
 
 
 0.636
AFZ43088.1
Ferredoxin (2Fe-2S); PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S]; COGs: COG0633 Ferredoxin; InterPro IPR010241:IPR001041:IPR006058; KEGG: ava:Ava_0568 ferredoxin (2Fe-2S); PFAM: ferredoxin; SPTR: Ferredoxin (2Fe-2S); TIGRFAM: ferredoxin [2Fe-2S].
  
 
 
 0.589
ndhI
NADH-plastoquinone oxidoreductase, I subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient; Belongs to the complex I 23 kDa subunit family.
      
 0.575
AFZ42764.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR017937:IPR006662:IPR017936:IPR013766; KEGG: mar:MAE_46030 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin; Belongs to the thioredoxin family.
     
 0.561
AFZ43288.1
PFAM: Protein of unknown function (DUF1092); InterPro IPR009472; KEGG: cyc:PCC7424_0060 protein of unknown function DUF1092; PFAM: protein of unknown function DUF1092; SPTR: Putative uncharacterized protein.
  
     0.527
AFZ44849.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: npu:Npun_F4810 photosystem II manganese-stabilizing protein PsbO; PFAM: photosystem II manganese-stabilizing protein PsbO; SPTR: Photosystem II manganese-stabilizing protein PsbO.
  
   
 0.501
AFZ43966.1
Ferredoxin (2Fe-2S); PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S]; COGs: COG0633 Ferredoxin; InterPro IPR006058:IPR001041:IPR010241; KEGG: cyc:PCC7424_2108 ferredoxin (2Fe-2S); PFAM: ferredoxin; SPTR: Ferredoxin (2Fe-2S); TIGRFAM: ferredoxin [2Fe-2S]; manually curated.
  
 
 
 0.500
AFZ42290.1
PFAM: PsaD; InterPro IPR003685; KEGG: ter:Tery_3791 photosystem I protein PsaD; PFAM: photosystem I protein PsaD; SPTR: Photosystem I subunit II.
  
   
 0.458
AFZ44875.1
PFAM: NnrU protein; COGs: COG4094 membrane protein; KEGG: mar:MAE_42990 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.448
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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