STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ42903.1PFAM: CRISPR-associated protein (Cas_APE2256); TIGRFAM: putative CRISPR-associated protein, APE2256 family; COGs: COG4006 conserved hypothetical protein; InterPro IPR013442; KEGG: cyc:PCC7424_5837 CRISPR-associated protein, APE2256 family; PFAM: CRISPR-associated protein APE2256; SPTR: CRISPR-associated protein, APE2256 family; TIGRFAM: CRISPR-associated protein, APE2256 family. (382 aa)    
Predicted Functional Partners:
AFZ42904.1
PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013411:IPR005537; KEGG: naz:Aazo_2390 SSO1426 family CRISPR-associated RAMP protein; PFAM: protein of unknown function DUF324; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family.
 
     0.680
AFZ42901.1
PFAM: RAMP superfamily; CRISPR-associated protein (Cas_Cmr3); TIGRFAM: CRISPR-associated RAMP protein, Csx10 family; InterPro IPR013490:IPR005537; KEGG: ana:all1477 hypothetical protein; PFAM: protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Csx10 family; TIGRFAM: CRISPR-associated RAMP protein, Csx10 family.
 
     0.595
AFZ42899.1
CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B; InterPro IPR013407; KEGG: ana:all1479 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein, Crm2 family.
 
     0.591
AFZ42905.1
KEGG: cyc:PCC7424_1907 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.578
AFZ42900.1
Protein of unknown function DUF324; PFAM: RAMP superfamily; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: cyb:CYB_0594 CRISPR-associated Csm3 family protein; PFAM: protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein.
 
     0.575
AFZ42906.1
Protein of unknown function DUF324; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: cya:CYA_0876 CRISPR-associated RAMP family protein; PFAM: protein of unknown function DUF324; SPTR: Putative uncharacterized protein.
 
     0.517
AFZ42902.1
KEGG: ana:all1476 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.503
AFZ43579.1
Hypothetical protein; PFAM: T5orf172 domain; KEGG: cyp:PCC8801_3235 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.436
AFZ42908.1
Hypothetical protein; PFAM: RAMP superfamily; KEGG: cyn:Cyan7425_0158 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
     0.430
AFZ42907.1
KEGG: cyn:Cyan7425_0159 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.423
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.