STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ43029.1PFAM: Peptidase family M48; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: cyc:PCC7424_4281 hypothetical protein; PFAM: peptidase M48 Ste24p; SPTR: Putative uncharacterized protein. (281 aa)    
Predicted Functional Partners:
AFZ43030.1
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: cyp:PCC8801_3494 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family.
 
    0.958
AFZ43684.1
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family; InterPro IPR000209; KEGG: cyp:PCC8801_0578 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Putative uncharacterized protein.
  
   
 0.757
AFZ42496.1
Hypothetical protein; PFAM: TM2 domain; KEGG: ava:Ava_0929 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.720
AFZ45830.1
PFAM: Bacterial pre-peptidase C-terminal domain; InterPro IPR007280; KEGG: cyh:Cyan8802_1197 peptidase domain protein; PFAM: peptidase domain protein; SPTR: Peptidase domain protein; manually curated.
  
  
 0.710
AFZ45593.1
PFAM: Protein of unknown function (DUF2288); COGs: COG5626 Uncharacterized small conserved protein; InterPro IPR018741; KEGG: naz:Aazo_2010 hypothetical protein; PFAM: Protein of unknown function DUF2288; SPTR: Putative uncharacterized protein.
  
     0.686
AFZ44763.1
KEGG: cyt:cce_0904 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.682
AFZ44878.1
PFAM: Tellurite resistance protein TerB; KEGG: npu:Npun_F4645 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.666
AFZ44076.1
KEGG: cyh:Cyan8802_3832 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.662
AFZ44814.1
KEGG: syp:SYNPCC7002_A2419 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.650
AFZ44596.1
KEGG: cyc:PCC7424_5030 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.621
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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