STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ43174.1Protein of unknown function DUF2330; PFAM: Uncharacterized protein conserved in bacteria (DUF2330); COGs: COG4402 conserved hypothetical protein; InterPro IPR019283:IPR016838; KEGG: cyt:cce_2024 hypothetical protein; PFAM: Protein of unknown function DUF2330; SPTR: Putative uncharacterized protein. (439 aa)    
Predicted Functional Partners:
AFZ43173.1
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
     0.981
AFZ43470.1
Filamentous hemagglutinin outer membrane protein; COGs: COG4995 conserved hypothetical protein; KEGG: ter:Tery_0572 filamentous haemagglutinin outer membrane protein; SPTR: Putative uncharacterized protein.
  
     0.470
AFZ45607.1
GTP-binding protein HSR1-related protein; PFAM: GTPase of unknown function; InterPro IPR002917; KEGG: cyh:Cyan8802_3901 GTP-binding protein HSR1-related; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein HSR1-related.
  
     0.407
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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