STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ43344.1KEGG: cyc:PCC7424_1928 hypothetical protein; SPTR: Putative uncharacterized protein. (369 aa)    
Predicted Functional Partners:
AFZ43343.1
PFAM: Multicopper oxidase; COGs: COG2132 Putative multicopper oxidase; InterPro IPR017909:IPR011707:IPR011706; KEGG: cyn:Cyan7425_3471 multicopper oxidase type 3; PFAM: multicopper oxidase type 3; multicopper oxidase type 2; SPTR: Multicopper oxidase type 3.
 
     0.661
AFZ43261.1
PFAM: Bacterial type II secretion system protein F domain; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR001992:IPR003004:IPR018076; KEGG: cyh:Cyan8802_1638 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein.
  
  
 0.629
AFZ45484.1
Type 4 prepilin peptidase 1; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.595
AFZ44151.1
PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: cyh:Cyan8802_4131 ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR: ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein.
  
  
 0.577
AFZ43263.1
PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593:IPR007831:IPR001482; KEGG: mar:MAE_04090 pilus biogenesis protein; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: GSPII_E N-terminal domain family.
  
  
 0.556
AFZ44602.1
KEGG: cyt:cce_3749 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.544
ruvC
Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.540
AFZ44601.1
PFAM: Protein of unknown function (DUF1517); KEGG: cyt:cce_3748 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.495
AFZ44008.1
COGs: COG5502 conserved hypothetical protein; KEGG: cyn:Cyan7425_0357 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.462
AFZ43753.1
KEGG: cyt:cce_2421 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.459
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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