STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ43354.1PFAM: Glutaredoxin-like domain (DUF836); InterPro IPR008554; KEGG: ava:Ava_1148 glutaredoxin 2; PFAM: glutaredoxin 2; SPTR: Glutaredoxin domain family protein. (87 aa)    
Predicted Functional Partners:
AFZ42429.1
PFAM: Protein of unknown function (DUF3252); KEGG: syn:ssl0352 hypothetical protein; SPTR: Ssl0352 protein.
  
     0.772
AFZ42485.1
S-layer domain-containing protein; PFAM: S-layer homology domain; InterPro IPR001119; KEGG: cyc:PCC7424_4625 S-layer domain protein; PFAM: S-layer domain-containing protein; SPTR: S-layer domain protein.
  
     0.772
AFZ42933.1
PFAM: Domain of unknown function (DUF1817); COGs: COG5474 conserved hypothetical protein; InterPro IPR014946; KEGG: cyh:Cyan8802_1730 hypothetical protein; PFAM: Domain of unknown function DUF1817; SPTR: Putative uncharacterized protein.
  
     0.772
ndhN
NADH dehydrogenase I subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.772
AFZ44873.1
PFAM: Protein of unknown function (DUF3143); KEGG: ter:Tery_2431 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
AFZ45649.1
PFAM: RbcX protein; InterPro IPR003435; KEGG: cyh:Cyan8802_1629 chaperonin family protein RbcX; PFAM: chaperonin family protein RbcX; SPTR: Chaperonin family protein RbcX.
  
     0.769
AFZ42733.1
Heat shock protein DnaJ domain protein; PFAM: Protein of unknown function (DUF3353); InterPro IPR001623; KEGG: cyc:PCC7424_1533 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SPTR: Heat shock protein DnaJ domain protein.
  
     0.768
AFZ45940.1
KEGG: cyt:cce_0318 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
AFZ44298.1
KEGG: cyn:Cyan7425_4018 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
AFZ45802.1
PFAM: Chlorophyll A-B binding protein; KEGG: cyt:cce_1543 putative CAB/ELIP/HLIP superfamily protein; SPTR: Putative uncharacterized protein.
  
     0.763
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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