STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ43411.1KEGG: cyc:PCC7424_1648 hypothetical protein; SPTR: Putative uncharacterized protein. (220 aa)    
Predicted Functional Partners:
AFZ43429.1
KEGG: cyc:PCC7424_1650 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
AFZ45731.1
KEGG: cyu:UCYN_00180 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.720
AFZ45792.1
KEGG: syn:slr1601 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.719
AFZ44295.1
KEGG: npu:Npun_R1002 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.714
AFZ45587.1
Hypothetical protein; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: cyc:PCC7424_3550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.708
AFZ44531.1
KEGG: ava:Ava_4233 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.706
AFZ42379.1
KEGG: ava:Ava_3688 type IV pilus assembly protein PilO; SPTR: Putative uncharacterized protein.
  
     0.690
AFZ42706.1
KEGG: ana:all4790 hypothetical protein; SPTR: All4790 protein.
  
     0.690
AFZ45474.1
KEGG: cyh:Cyan8802_2029 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.685
AFZ42519.1
Peptidase metallopeptidase; PFAM: Matrixin; COGs: COG5549 Zn-dependent protease; InterPro IPR006026; KEGG: cyc:PCC7424_2212 hypothetical protein; SMART: peptidase metallopeptidase; SPTR: Similar to Zn-dependent protease.
  
     0.684
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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