STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ43415.1KEGG: cya:CYA_1898 hypothetical protein; SPTR: Putative uncharacterized protein. (186 aa)    
Predicted Functional Partners:
AFZ43719.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: amr:AM1_0952 transcriptional regulator, putative; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain protein.
  
     0.751
AFZ43830.1
KEGG: syp:SYNPCC7002_A2572 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.627
AFZ44940.1
Hypothetical protein; PFAM: Galactose-3-O-sulfotransferase; KEGG: chu:CHU_0855 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.620
AFZ44486.1
PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: hoh:Hoch_4759 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Transporter, major facilitator family.
  
     0.578
AFZ44470.1
Hypothetical protein; PFAM: UbiA prenyltransferase family; KEGG: cyt:cce_4236 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.566
AFZ44260.1
Hypothetical protein; PFAM: GDSL-like Lipase/Acylhydrolase; KEGG: cyh:Cyan8802_2963 hypothetical protein; SPTR: GDSL-like lipase/acylhydrolase domain protein.
  
     0.565
AFZ45548.1
PFAM: N2,N2-dimethylguanosine tRNA methyltransferase; TIGRFAM: tRNA(guanine-26,N2-N2) methyltransferase; COGs: COG1867 N2 N2-dimethylguanosine tRNA methyltransferase; InterPro IPR002905; KEGG: cyn:Cyan7425_0835 tRNA (guanine-N(2)-)-methyltransferase; PFAM: N2N2-dimethylguanosine tRNA methyltransferase; SPTR: N2,N2-dimethylguanosine tRNA methyltransferase.
  
     0.557
AFZ43416.1
PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; HEAT repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR021133:IPR004155:IPR000357; KEGG: cyc:PCC7424_2563 PBS lyase heat domain protein repeat-containing protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT domain containing protein; SPTR: PBS lyase HEAT domain protein repeat-containing protein.
       0.545
AFZ44064.1
KEGG: cyn:Cyan7425_5172 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.510
AFZ45036.1
KEGG: syp:SYNPCC7002_A2849 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.499
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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