STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ43517.1PFAM: O-Antigen ligase; InterPro IPR013026:IPR007016; KEGG: cyp:PCC8801_1355 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: O-antigen polymerase. (835 aa)    
Predicted Functional Partners:
AFZ43737.1
PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: cyh:Cyan8802_2744 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.901
AFZ42991.1
KEGG: cyc:PCC7424_2046 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.613
AFZ44062.1
Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR005702:IPR003856; KEGG: cyn:Cyan7425_2153 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Putative uncharacterized protein; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.561
AFZ43020.1
PFAM: Protein required for attachment to host cells; InterPro IPR019291; KEGG: cyh:Cyan8802_1837 hypothetical protein; PFAM: Host attachment protein; SPTR: Putative uncharacterized protein.
  
     0.532
AFZ45110.1
PFAM: Phosphotransferase enzyme family; COGs: COG2334 Putative homoserine kinase type II (protein kinase fold); InterPro IPR002575; KEGG: cyc:PCC7424_0991 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Aminoglycoside phosphotransferase.
  
     0.530
AFZ43515.1
KEGG: mar:MAE_18130 hypothetical protein; SPTR: Genome sequencing data, contig C324.
       0.524
AFZ43516.1
KEGG: cyn:Cyan7425_3724 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.524
AFZ44915.1
KEGG: naz:Aazo_4908 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.517
AFZ43518.1
PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: DNA phosphorothioation system restriction enzyme; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014021:IPR001650:IPR014001:IPR006935; KEGG: cyc:PCC7424_2593 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: Type III restriction protein res subunit.
       0.508
AFZ43367.1
PFAM: Protein of unknown function DUF55; InterPro IPR002740; KEGG: cyh:Cyan8802_0084 protein of unknown function DUF55; PFAM: protein of unknown function DUF55; SPTR: Putative uncharacterized protein; manually curated.
 
     0.427
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.