STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ43753.1KEGG: cyt:cce_2421 hypothetical protein; SPTR: Putative uncharacterized protein. (124 aa)    
Predicted Functional Partners:
AFZ43754.1
PFAM: Bacterial protein of unknown function (DUF924); COGs: COG3803 conserved hypothetical protein; InterPro IPR010323; KEGG: cyc:PCC7424_5377 protein of unknown function DUF924; PFAM: protein of unknown function DUF924; SPTR: Putative uncharacterized protein.
       0.773
AFZ43297.1
Hypothetical protein; PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: cyc:PCC7424_3511 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.703
AFZ42683.1
KEGG: npu:Npun_F2488 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.693
AFZ43752.1
CHP725-containing protein; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; KEGG: cyt:cce_4756 CHP725-containing protein; SPTR: Putative uncharacterized protein.
 
     0.689
AFZ43299.1
KEGG: cyt:cce_2677 HetP protein; SPTR: HetP protein.
  
     0.683
AFZ44880.1
KEGG: cyt:cce_3095 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.654
AFZ42982.1
PFAM: Aminotransferase class IV; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: cyc:PCC7424_3756 aminotransferase class IV; PFAM: aminotransferase class IV; SPTR: Aminotransferase class IV.
  
     0.600
AFZ43460.1
KEGG: npu:Npun_F0027 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.597
ndhL
NAD(P)H-quinone oxidoreductase subunit L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
       0.588
AFZ44764.1
PFAM: Protein of unknown function (DUF3352); KEGG: cyc:PCC7424_0630 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.544
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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