STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44013.1KEGG: amr:AM1_3792 hypothetical protein; SPTR: Putative uncharacterized protein. (132 aa)    
Predicted Functional Partners:
AFZ44014.1
KEGG: npu:Npun_F6334 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.594
AFZ44015.1
ABC-1 domain-containing protein; PFAM: ABC1 family; COGs: COG0661 unusual protein kinase; InterPro IPR000719:IPR004147; KEGG: cyc:PCC7424_3680 ABC-1 domain protein; PFAM: ABC-1 domain-containing protein; SPTR: ABC-1 domain protein.
       0.594
AFZ43818.1
KEGG: cyp:PCC8801_3531 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.445
AFZ44662.1
KEGG: cyh:Cyan8802_0168 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.431
AFZ45652.1
Forkhead-associated protein; PFAM: FHA domain; InterPro IPR000253; KEGG: tel:tll1487 hypothetical protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Tll1487 protein.
  
 
   0.425
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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