STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44042.1PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; COGs: COG1035 Coenzyme F420-reducing hydrogenase beta subunit; InterPro IPR017896:IPR007516:IPR007525; KEGG: maq:Maqu_2619 coenzyme F420 hydrogenase/dehydrogenase beta subunit; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; SPTR: Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein. (481 aa)    
Predicted Functional Partners:
AFZ43605.1
PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; COGs: COG1035 Coenzyme F420-reducing hydrogenase beta subunit; InterPro IPR017896:IPR007516:IPR007525; KEGG: cyt:cce_3352 hypothetical protein; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; SPTR: Putative uncharacterized protein.
  
  
 
0.920
AFZ45158.1
NAD(P)-dependent nickel-iron dehydrogenase subunit HoxY; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; COGs: COG1941 Coenzyme F420-reducing hydrogenase gamma subunit; InterPro IPR006137; KEGG: cyn:Cyan7425_4046 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: NADH ubiquinone oxidoreductase 20 kDa subunit.
  
 
 0.811
AFZ45570.1
KEGG: cyn:Cyan7425_5316 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.724
AFZ44558.1
Assimilatory nitrate reductase (ferredoxin) precursor; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963:IPR006656:IPR006657:IPR006655; KEGG: npu:Npun_R1526 molybdopterin oxidoreductase NarB; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing [...]
  
 
 0.700
AFZ44041.1
Hypothetical protein; PFAM: Polysaccharide pyruvyl transferase; COGs: COG2327 conserved hypothetical protein; KEGG: sse:Ssed_2981 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.694
AFZ44039.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ava:Ava_4840 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2.
       0.686
AFZ44040.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyn:Cyan7425_2180 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Probable glycosyl transferase.
       0.686
AFZ44043.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyn:Cyan7425_2164 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2.
       0.645
AFZ42798.1
Cadherin; COGs: COG5276 conserved hypothetical protein; InterPro IPR002126:IPR013211:IPR007280; KEGG: nmu:Nmul_A0927 phosphoesterase, PA-phosphatase related; PFAM: Cadherin; LVIVD repeat-containing protein; peptidase domain protein; SPTR: YD repeat protein.
  
     0.605
AFZ44044.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: npu:Npun_R1491 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Putative uncharacterized protein.
       0.605
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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