STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44049.1PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyn:Cyan7425_2164 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2. (344 aa)    
Predicted Functional Partners:
AFZ45122.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: syw:SYNW0454 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Possible glycosyltransferase.
  
     0.768
AFZ44060.1
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cyn:Cyan7425_2157 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative nucleoside-diphosphate sugar epimerase.
  
    0.707
AFZ44048.1
Hypothetical protein; PFAM: Acyltransferase family; KEGG: cyn:Cyan7425_2177 hypothetical protein; SPTR: Integral membrane protein; manually curated.
       0.651
AFZ44051.1
PFAM: ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR017871:IPR003593:IPR003439:IPR017940; KEGG: amr:AM1_3779 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATP-binding protein of ABC transporter.
 
    0.646
AFZ42344.1
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cyh:Cyan8802_3632 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2.
  
     0.644
AFZ44057.1
Methyltransferase type 12; PFAM: C-methyltransferase; KEGG: cyn:Cyan7425_2166 methyltransferase type 12; SPTR: Putative methyltransferase.
  
     0.644
AFZ44058.1
PFAM: C-methyltransferase; InterPro IPR013691; KEGG: cyn:Cyan7425_2163 C-methyltransferase; PFAM: C-methyltransferase; SPTR: C-methyltransferase.
  
     0.639
AFZ44050.1
PFAM: Sulfotransferase domain; InterPro IPR000863; KEGG: saq:Sare_1720 sulfotransferase; PFAM: sulfotransferase; SPTR: Sulfotransferase.
       0.625
AFZ44052.1
Protein of unknown function NKWYS; PFAM: Putative capsular polysaccharide synthesis protein; InterPro IPR018831; KEGG: cyt:cce_4394 hypothetical protein; PFAM: Protein of unknown function NKWYS; SPTR: Putative uncharacterized protein.
       0.527
AFZ44039.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ava:Ava_4840 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2.
 
    
0.524
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.