STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44147.1PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: mar:MAE_11730 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein. (570 aa)    
Predicted Functional Partners:
AFZ43341.1
PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: cyc:PCC7424_3626 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component.
  
  
 0.802
AFZ44148.1
PFAM: PhoD-like phosphatase; COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; KEGG: cyn:Cyan7425_1386 alkaline phosphatase; PRIAM: Alkaline phosphatase; SPTR: Alkaline phosphatase.
 
   
 0.590
AFZ43041.1
PFAM: N-6 DNA Methylase; InterPro IPR002296:IPR003356:IPR002052; KEGG: hau:Haur_0544 hypothetical protein; PFAM: N-6 DNA methylase; SPTR: N-6 DNA methylase.
  
     0.483
AFZ42280.1
PFAM: von Willebrand factor type A domain; COGs: COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478 contains von Willebrand factor (vWF) domain; InterPro IPR002035; KEGG: dat:HRM2_14740 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Phage/colicin/tellurite resistance cluster TerY protein, putative.
  
     0.479
AFZ44149.1
Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: cya:CYA_2289 Ser/Thr protein phosphatase family protein; PFAM: metallophosphoesterase; SPTR: Ser/Thr protein phosphatase family protein.
 
     0.477
AFZ43162.1
PFAM: ABC transporter; TOBE domain; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593:IPR013611; KEGG: cyh:Cyan8802_1784 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: ABC transporter.
  
  
 0.463
AFZ43010.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR000103:IPR013027:IPR003953; KEGG: ava:Ava_3376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Pyridine nucleotide-disulphide oxidoreductase, putative.
  
    0.452
AFZ42443.1
PFAM: Cyclic nucleotide-binding domain; InterPro IPR000595; KEGG: ava:Ava_1134 cyclic nucleotide-binding domain-containing protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain (CNMP-BD) protein.
  
     0.445
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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