STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44177.1Transport system permease protein; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: syp:SYNPCC7002_G0088 iron ABC transporter permease; PFAM: transport system permease protein; SPTR: FecCD transport (Permease) family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (354 aa)    
Predicted Functional Partners:
AFZ44175.1
PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439:IPR017871; KEGG: ana:all2584 ATP-binding protein of ferrichrome ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATP-binding protein of ferrichrome ABC transporter.
 
 
 0.998
AFZ45702.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: syp:SYNPCC7002_G0005 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: Periplasmic binding protein.
 
 
 0.975
AFZ45045.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: cyc:PCC7424_3425 putative iron transport system substrate-binding protein; PFAM: periplasmic binding protein; SPTR: Periplasmic binding protein.
 
 
 0.915
AFZ44176.1
Transport system permease protein; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: amr:AM1_A0162 iron(III) dicitrate ABC transporter, permease protein; PFAM: transport system permease protein; SPTR: Iron(III) dicitrate ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    
0.826
AFZ44178.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase); COGs: COG5464 conserved hypothetical protein; KEGG: ana:all3819 hypothetical protein; SPTR: All3819 protein.
       0.556
AFZ42624.1
Phosphate ABC transporter substrate-binding protein, PhoT family; TIGRFAM: phosphate binding protein; COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR011862; KEGG: ana:alr1094 periplasmic phosphate-binding protein of ABC transporter; SPTR: Periplasmic phosphate-binding protein of ABC transporter; TIGRFAM: phosphate binding protein.
      
 0.533
AFZ44598.1
PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: npu:Npun_R5017 ferric uptake regulator family protein; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; Belongs to the Fur family.
      
 0.479
AFZ45448.1
PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: cyh:Cyan8802_4174 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; Belongs to the Fur family.
      
 0.479
AFZ45775.1
PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: cyc:PCC7424_3952 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; Belongs to the Fur family.
      
 0.479
AFZ42414.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Localisation of periplasmic protein complexes; TIGRFAM: TonB-dependent siderophore receptor; COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR010105:IPR012910:IPR000531; KEGG: amr:AM1_3393 TonB-dependent siderophore receptor protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent siderophore receptor subfamily; TIGRFAM: TonB-dependent siderophore receptor.
 
  
 0.467
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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