STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44181.1TIGRFAM: conserved hypothetical protein (putative transposase or invertase); COGs: COG5464 conserved hypothetical protein; KEGG: ana:all3819 hypothetical protein; SPTR: All3819 protein. (281 aa)    
Predicted Functional Partners:
AFZ45884.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase); InterPro IPR010106; KEGG: mar:MAE_01030 hypothetical protein; SPTR: Genome sequencing data, contig C299.
  
     0.608
AFZ45132.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: cyp:PCC8801_1317 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.572
AFZ45920.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyh:Cyan8802_3704 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.536
AFZ44706.1
KEGG: amr:AM1_3060 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.530
AFZ45608.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyt:cce_2320 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.509
AFZ45133.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: cyh:Cyan8802_1345 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.500
AFZ42721.1
PFAM: Gas vesicle synthesis protein GvpL/GvpF; InterPro IPR009430; KEGG: npu:Npun_F2158 gas vesicle synthesis protein GvpW; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: Gas vesicle synthesis protein GvpW.
  
     0.498
AFZ43612.1
PFAM: Bacterial TniB protein; COGs: COG2842 Uncharacterized ATPase putative transposase; InterPro IPR008868; KEGG: cyc:PCC7424_0976 TniB family protein; PFAM: TniB family protein; SPTR: TniB family protein.
  
     0.478
AFZ44704.1
KEGG: amr:AM1_3058 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.451
AFZ42316.1
PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); COGs: COG5464 conserved hypothetical protein; InterPro IPR010106; KEGG: ava:Ava_4271 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.426
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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