STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44526.1PFAM: Tic22-like family; InterPro IPR007378; KEGG: cyc:PCC7424_1454 Tic22 family protein; PFAM: Tic22 family proein; SPTR: Tic22-like family. (250 aa)    
Predicted Functional Partners:
AFZ44524.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: cyc:PCC7424_4959 GUN4 domain protein; PFAM: GUN4 domain protein; SPTR: GUN4-like family.
 
     0.796
prmC
protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.790
AFZ45093.1
KEGG: cyc:PCC7424_4211 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.720
AFZ42769.1
PFAM: Domain of unknown function (DUF1995); InterPro IPR018962; KEGG: cyh:Cyan8802_3366 hypothetical protein; PFAM: Domain of unknown function DUF1995; SPTR: Putative uncharacterized protein.
  
     0.669
AFZ45587.1
Hypothetical protein; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: cyc:PCC7424_3550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.662
AFZ45846.1
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: cyc:PCC7424_0097 protein of unknown function DUF1239; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein.
  
     0.660
AFZ42396.1
Protein of unknown function CP12; PFAM: CP12 domain; InterPro IPR003823; KEGG: cyh:Cyan8802_0941 protein of unknown function CP12; PFAM: protein of unknown function CP12; SPTR: Putative uncharacterized protein.
  
     0.649
AFZ44619.1
Fibrillin; PFAM: PAP_fibrillin; KEGG: cyt:cce_3570 fibrillin; SPTR: PAP fibrillin family protein.
  
     0.631
AFZ44471.1
FAD dependent oxidoreductase; InterPro IPR006076; KEGG: cyh:Cyan8802_0567 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein.
  
     0.627
AFZ44523.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyn:Cyan7425_4909 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
       0.625
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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