STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44613.1Microcompartments protein; PFAM: BMC domain; InterPro IPR000249; KEGG: cyt:cce_3523 hypothetical protein; PFAM: microcompartments protein; SPTR: Putative uncharacterized protein. (212 aa)    
Predicted Functional Partners:
AFZ45644.1
PFAM: Ethanolamine utilisation protein EutN/carboxysome; COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: mar:MAE_47920 carbon dioxide concentrating mechanism protein; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Genome sequencing data, contig C303.
 
 
 
 0.767
AFZ45642.1
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: cyh:Cyan8802_1621 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein.
 
 
 
 0.701
AFZ45643.1
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: amr:AM1_5381 carbon dioxide concentrating mechanism protein CcmK; PFAM: microcompartments protein; SPTR: Carbon dioxide concentrating mechanism protein CcmK.
 
 
 
 0.701
AFZ43840.1
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808:IPR000249; KEGG: syn:slr0436 carbon dioxide concentrating mechanism protein; CcmK; PFAM: microcompartments protein; SPTR: Uncharacterized protein slr0436.
 
 
 
 0.673
AFZ42581.1
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: naz:Aazo_3759 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein.
 
 
 
 0.652
AFZ42582.1
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808:IPR000249; KEGG: cyt:cce_2434 carbon dioxide concentrating mechanism protein; PFAM: microcompartments protein; SPTR: Microcompartments protein.
 
 
 
 0.571
AFZ43772.1
PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: cyc:PCC7424_5151 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Carbohydrate kinase FGGY.
  
     0.432
AFZ44614.1
PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: cyt:cce_2291 processing protease; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 inactive domain family.
       0.413
AFZ42568.1
PFAM: Protein of unknown function (DUF1257); InterPro IPR009666; KEGG: ter:Tery_1046 hypothetical protein; PFAM: protein of unknown function DUF1257; SPTR: Putative uncharacterized protein.
  
     0.404
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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