STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44688.1PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR003593:IPR001140:IPR 017871; KEGG: gvi:glr1067 HlyB/MsbA family ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: HlyB/MsbA family ABC transporter. (611 aa)    
Predicted Functional Partners:
AFZ44691.1
Hypothetical protein; PFAM: Glycosyltransferase family 28 C-terminal domain; COGs: COG4671 glycosyl transferase; KEGG: gvi:glr1064 hypothetical protein; SPTR: Glr1064 protein.
 
     0.855
AFZ44689.1
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: gvi:glr1066 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glr1066 protein.
 
     0.838
AFZ44690.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: amr:AM1_6382 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein.
 
   0.815
AFZ44693.1
PFAM: Glycosyltransferase family 28 C-terminal domain; COGs: COG4671 glycosyl transferase; InterPro IPR007235; KEGG: ana:alr5197 hypothetical protein; PFAM: Glycosyltransferase 28 domain; SPTR: Alr5197 protein.
 
     0.791
AFZ44687.1
PFAM: Phosphoglycerate mutase family; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: amr:AM1_6376 phosphoglycerate mutase, putative; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase, putative.
       0.774
AFZ45354.1
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
     
0.721
AFZ44692.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: afr:AFE_0615 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1.
 
   0.696
AFZ44694.1
Integral membrane sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR003660:IPR003661:IPR003594:IPR 004358; KEGG: amr:AM1_C0305 two-component sensor histidine kinase, putative; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP [...]
 
 
   0.590
AFZ44954.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: ABC transporter; ABC transporter transmembrane region; Cyclic nucleotide-binding domain; TIGRFAM: type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR000595:IPR003439:IPR017940:IPR005074:IPR 003593:IPR001140:IPR017871:IPR019825:IPR010132; KEGG: cyh:Cyan8802_0545 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: ABC transporter related; ABC transporter transmembrane regio [...]
 
 
  
0.464
AFZ43301.1
Bacteriocin-processing peptidase; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; Cyclic nucleotide-binding domain; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR017871:IPR005897:IPR000595:IPR003439:IPR 017940:IPR005074:IPR003593:IPR001140; KEGG: cyc:PCC7424_3519 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: ABC transporter related; peptidase C39 bacterioc [...]
 
 
 
0.462
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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