STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44829.1Folate-binding protein YgfZ; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: folate-binding protein YgfZ; COGs: COG0354 aminomethyltransferase related to GcvT; InterPro IPR006222:IPR013977:IPR017703; KEGG: cyh:Cyan8802_0061 folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; SPTR: Glycine cleavage T protein (Aminomethyl transferase); TIGRFAM: folate-binding protein YgfZ; Belongs to the GcvT family. (323 aa)    
Predicted Functional Partners:
AFZ44830.1
KEGG: cyc:PCC7424_1988 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.800
AFZ44832.1
Ferredoxin thioredoxin reductase beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
 
     0.781
AFZ44831.1
PFAM: Domain of unknown function (DUF309); COGs: COG1547 conserved hypothetical protein; InterPro IPR005500; KEGG: cyh:Cyan8802_1551 protein of unknown function DUF309; PFAM: protein of unknown function DUF309; SPTR: Conserved domain protein.
       0.774
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
  
   
 0.750
gcvP
Glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
   
 0.566
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
   
0.452
AFZ42427.1
PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR016092:IPR017870:IPR000361; KEGG: cyt:cce_0021 hypothetical protein; PFAM: HesB/YadR/YfhF-family protein; SPTR: Putative uncharacterized protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
 
 0.447
AFZ44833.1
InterPro IPR004360:IPR018146; KEGG: amr:AM1_0571 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
       0.434
AFZ45577.1
Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR006258:IPR013027:IPR004099:IPR000815:IPR 012999; KEGG: mar:MAE_50450 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipo [...]
  
     0.431
AFZ43551.1
COGs: COG4735 conserved hypothetical protein; KEGG: cyh:Cyan8802_1313 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.429
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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