STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44940.1Hypothetical protein; PFAM: Galactose-3-O-sulfotransferase; KEGG: chu:CHU_0855 hypothetical protein; SPTR: Putative uncharacterized protein. (228 aa)    
Predicted Functional Partners:
AFZ44941.1
KEGG: pme:NATL1_02721 hypothetical protein; SPTR: Putative capsular polysaccharide biosynthesis protein.
       0.773
AFZ43415.1
KEGG: cya:CYA_1898 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.620
AFZ43886.1
TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cyt:cce_1708 hypothetical protein; PFAM: secretion protein HlyD family protein; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.538
AFZ44938.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: naz:Aazo_4917 group 1 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1.
 
     0.485
AFZ44939.1
Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: fre:Franean1_2147 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11.
  
    0.472
AFZ44942.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: naz:Aazo_4918 group 1 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1.
       0.471
AFZ44943.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: naz:Aazo_4919 group 1 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1.
       0.471
AFZ44944.1
KEGG: naz:Aazo_4920 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.471
AFZ44285.1
PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; InterPro IPR005610; KEGG: cyt:cce_2792 photosystem II 13 kD protein; PFAM: photosystem II protein PsbW class I; SPTR: Photosystem II reaction center psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; Belongs to the Psb28 family.
  
     0.409
AFZ45015.1
PFAM: Domain of unknown function DUF; InterPro IPR000169:IPR003807; KEGG: cyt:cce_3845 hypothetical protein; PFAM: protein of unknown function DUF202; SPTR: Putative uncharacterized protein.
  
     0.404
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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