STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45020.1PFAM: Protein of unknown function (DUF1269); COGs: COG4803 membrane protein; KEGG: cyh:Cyan8802_1917 membrane protein of uknown function UCP014873; SPTR: Membrane protein of uknown function UCP014873. (174 aa)    
Predicted Functional Partners:
AFZ45019.1
PFAM: Protein of unknown function (DUF3611); KEGG: cyt:cce_2720 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.634
AFZ45012.1
KEGG: cyn:Cyan7425_2479 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.611
AFZ45021.1
Protein of unknown function DUF202; COGs: COG0385 Na+-dependent transporter; KEGG: cyc:PCC7424_1200 protein of unknown function DUF202; SPTR: Putative uncharacterized protein.
 
     0.568
AFZ45022.1
KEGG: cyc:PCC7424_1203 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.565
AFZ45023.1
PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fjo:Fjoh_3143 sulfatase; PFAM: sulfatase; SPTR: Sulfatase.
 
     0.533
AFZ45015.1
PFAM: Domain of unknown function DUF; InterPro IPR000169:IPR003807; KEGG: cyt:cce_3845 hypothetical protein; PFAM: protein of unknown function DUF202; SPTR: Putative uncharacterized protein.
  
     0.410
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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