STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45024.1Protein of unknown function DUF323; PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: cyc:PCC7424_1204 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein. (328 aa)    
Predicted Functional Partners:
AFZ45023.1
PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fjo:Fjoh_3143 sulfatase; PFAM: sulfatase; SPTR: Sulfatase.
 
   0.942
AFZ45011.1
PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: cyt:cce_3870 sulfatase; PFAM: sulfatase; SPTR: Sulfatase.
 
   0.869
AFZ45022.1
KEGG: cyc:PCC7424_1203 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.801
AFZ45021.1
Protein of unknown function DUF202; COGs: COG0385 Na+-dependent transporter; KEGG: cyc:PCC7424_1200 protein of unknown function DUF202; SPTR: Putative uncharacterized protein.
 
     0.527
AFZ45008.1
Hypothetical protein; KEGG: nwa:Nwat_0841 putative neuromedin U; SPTR: Putative Neuromedin U.
 
     0.514
AFZ45856.1
Methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase; COGs: COG4301 conserved hypothetical protein; InterPro IPR017804:IPR019257; KEGG: cyc:PCC7424_0149 methyltransferase; PFAM: Protein of unknown function DUF2260; SPTR: Putative uncharacterized protein; TIGRFAM: methyltransferase.
 
  
 0.473
AFZ45030.1
Hypothetical protein; InterPro IPR018087; KEGG: ppr:PBPRB0817 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.452
AFZ45017.1
PFAM: Domain of unknown function DUF; Sodium Bile acid symporter family; COGs: COG0385 Na+-dependent transporter; InterPro IPR003807:IPR002657; KEGG: cyc:PCC7424_1200 protein of unknown function DUF202; PFAM: protein of unknown function DUF202; Bile acid:sodium symporter; SPTR: Putative uncharacterized protein.
 
     0.433
AFZ45014.1
PFAM: Domain of unknown function DUF; COGs: COG2149 membrane protein; InterPro IPR003807; KEGG: cyt:cce_3846 hypothetical protein; PFAM: protein of unknown function DUF202; SPTR: Putative uncharacterized protein.
 
     0.415
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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