STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45128.1KEGG: cyp:PCC8801_2391 hypothetical protein; SPTR: Putative uncharacterized protein. (189 aa)    
Predicted Functional Partners:
AFZ45126.1
Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG4627 conserved hypothetical protein; InterPro IPR013216; KEGG: ana:alr0557 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Alr0557 protein.
       0.605
AFZ45127.1
KEGG: fjo:Fjoh_2514 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.605
AFZ45124.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tga:TGAM_2148 glycosyltransferase, family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase, family 2.
       0.533
AFZ45125.1
KEGG: xce:Xcel_2577 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.533
AFZ45122.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: syw:SYNW0454 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Possible glycosyltransferase.
       0.442
AFZ45123.1
Methyltransferase type 12; PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: csc:Csac_1682 methyltransferase type 11; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 11.
       0.442
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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