STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45237.1PFAM: Protein of unknown function, DUF255; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; KEGG: npu:Npun_R6218 hypothetical protein; SPTR: Putative uncharacterized protein. (677 aa)    
Predicted Functional Partners:
AFZ43061.1
Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; InterPro IPR001314:IPR001254:IPR018114; KEGG: ter:Tery_1884 peptidase S1 and S6, chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; SPTR: Putative uncharacterized protein.
    
 
 0.713
AFZ43770.1
KEGG: cyc:PCC7424_4009 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.713
AFZ44362.1
PFAM: Protein of unknown function (DUF3370); KEGG: mar:MAE_04620 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.713
AFZ44950.1
KEGG: mar:MAE_15620 hypothetical protein; SPTR: S-layer domain protein.
    
 
 0.713
AFZ45236.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; COGs: COG2179 hydrolase of the HAD superfamily; InterPro IPR010021:IPR006549; KEGG: syp:SYNPCC7002_A1119 HAD family phosphatase; SPTR: HAD superfamily (Subfamily IIIA) phosphatase; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA.
       0.519
AFZ45238.1
KEGG: ter:Tery_3317 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.453
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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