STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45469.1Neutral amino acid ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: syp:SYNPCC7002_A2091 high-affinity branched-chain amino acid transport protein; PFAM: inner-membrane translocator; SPTR: High-affinity branched-chain amino acid transport protein. (369 aa)    
Predicted Functional Partners:
AFZ45468.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: cyh:Cyan8802_2707 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related.
 
 0.998
AFZ42644.1
Neutral amino acid ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: npu:Npun_F3826 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator.
 
 0.997
AFZ42819.1
PFAM: ABC transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: cyc:PCC7424_3135 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: High-affinity branched-chain amino acid transport ATP-binding protein; BraG.
 
 0.988
AFZ43814.1
Neutral amino acid-binding protein; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: syp:SYNPCC7002_A2201 ABC transporter amino acid-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: ABC transporter amino acid-binding protein.
 
 
 0.986
AFZ43658.1
Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: amr:AM1_5991 branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease protein.
  
 0.939
AFZ43655.1
PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593:IPR017780; KEGG: amr:AM1_5988 branched chain amino acid ABC transporter, ATP-binding protein, putative; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Branched chain amino acid ABC transporter, ATP-binding protein, putative; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE.
  
 0.928
AFZ43233.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709:IPR001828; KEGG: mar:MAE_24210 hydrophobic amino acid uptake ABC-transporter; PFAM: Extracellular ligand-binding receptor; SPTR: Putative uncharacterized protein.
 
  
 0.903
AFZ43656.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; COGs: COG4674 Uncharacterized ABC-type transport system ATPase component; InterPro IPR003439:IPR003593:IPR017781; KEGG: amr:AM1_5989 branched chain amino acid ABC transporter, ATP-binding subunit, putative; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Branched chain amino acid ABC transporter, ATP-binding subunit, putative; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD.
  
 0.851
AFZ43659.1
ABC transporter, periplasmic solute-binding protein, putative; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; urea ABC transporter, urea binding protein; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR017909:IPR006311; KEGG: amr:AM1_5992 ABC transporter, periplasmic solute-binding protein, putative; SPTR: ABC transporter, periplasmic solute-binding protein, putative.
 
  
 0.813
AFZ43657.1
Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: amr:AM1_5990 branched chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Branched chain amino acid ABC transporter, permease protein.
  
     0.752
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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