STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45480.1PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: mar:MAE_36180 hypothetical protein; PFAM: protein of unknown function DUF29; SPTR: Putative uncharacterized protein. (137 aa)    
Predicted Functional Partners:
AFZ45554.1
Peptidylprolyl isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179:IPR013838; KEGG: cyc:PCC7424_0506 peptidylprolyl isomerase FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase.
    
 0.803
AFZ42457.1
PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: amr:AM1_3021 hypothetical protein; PFAM: protein of unknown function DUF29; SPTR: Putative uncharacterized protein.
  
     0.774
trmD
tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
       0.678
AFZ42989.1
Hypothetical protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR001307; KEGG: ana:all3220 hypothetical protein; SPTR: All3220 protein.
   
   0.659
AFZ43077.1
KEGG: syp:SYNPCC7002_A2624 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 0.581
AFZ45478.1
GAF sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR004358:IPR005467:IPR003661:IPR003594:IPR 003018; KEGG: npu:Npun_R4028 GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SPTR: GAF sensor signal transduction histidine kinase.
       0.506
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
   0.504
AFZ44922.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: cyp:PCC8801_2929 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.465
AFZ44347.1
PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR014021:IPR000330; KEGG: app:CAP2UW1_4591 hypothetical protein; PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Putative uncharacterized protein.
  
 
 
 0.464
AFZ45483.1
Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: cyc:PCC7424_0616 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein.
  
    0.430
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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