STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45748.1PFAM: Plasmid maintenance system killer protein; COGs: COG3549 Plasmid maintenance system killer protein; InterPro IPR007711; KEGG: syn:ssr5020 hypothetical protein; PFAM: plasmid maintenance system killer; SPTR: Similar to tr|Q6ZEW0|Q6ZEW0. (93 aa)    
Predicted Functional Partners:
AFZ45747.1
TIGRFAM: addiction module antidote protein, HigA family; COGs: COG3093 Plasmid maintenance system antidote protein; InterPro IPR013430; KEGG: mar:MAE_16330 plasmid maintenance system antidote protein; SPTR: Plasmid maintenance system antidote protein; TIGRFAM: addiction module antidote protein, HigA family.
 
 
 
 0.988
AFZ42822.1
Helix-turn-helix domain protein; PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; InterPro IPR001387; KEGG: cyn:Cyan7425_1808 XRE family plasmid maintenance system antidote protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Plasmid maintenance system antidote protein, XRE family.
   
 
 0.775
AFZ44563.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
      
 0.465
AFZ45749.1
KEGG: ptm:GSPATT00037937001 hypothetical protein; SPTR: Chromosome undetermined scaffold_175, whole genome shotgun sequence.
       0.431
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.