STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45809.1KEGG: cyc:PCC7424_5222 hypothetical protein; SPTR: Putative uncharacterized protein. (174 aa)    
Predicted Functional Partners:
cpcS-2
Protein of unknown function CpeS/Ycf58; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.622
AFZ42646.1
PFAM: NC domain; PspA/IM30 family; InterPro IPR007157; KEGG: cyc:PCC7424_2236 NC domain protein; PFAM: PspA/IM30 family protein; SPTR: NC domain family.
  
     0.569
AFZ45955.1
KEGG: ana:asr4678 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.561
AFZ43364.1
KEGG: cyh:Cyan8802_4081 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.551
AFZ45300.1
KEGG: npu:Npun_F0977 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.547
AFZ44609.1
PFAM: Protein of unknown function (DUF3134); KEGG: mar:MAE_00960 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.539
AFZ45808.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873:IPR020845; KEGG: cyt:cce_1133 long-chain-fatty-acid CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Probable long-chain-fatty-acid CoA ligase.
       0.535
AFZ43736.1
KEGG: cyh:Cyan8802_3793 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.518
AFZ45910.1
PFAM: M42 glutamyl aminopeptidase; COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: nhl:Nhal_2064 peptidase M42 family protein; PFAM: peptidase M42 family protein; SPTR: Peptidase M42 family protein.
  
     0.514
AFZ42347.1
Protein of unknown function DUF155; PFAM: Uncharacterised ACR, YagE family COG1723; COGs: COG1723 conserved hypothetical protein; InterPro IPR003734; KEGG: ava:Ava_5021 hypothetical protein; PFAM: protein of unknown function DUF155; SPTR: Putative uncharacterized protein.
  
     0.492
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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