STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45836.1PFAM: ABC transporter; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: ter:Tery_1362 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; manually curated. (449 aa)    
Predicted Functional Partners:
AFZ45835.1
PFAM: ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412:IPR013525; KEGG: npu:Npun_F4532 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter superfamily.
 
 0.999
AFZ44893.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: cyh:Cyan8802_1535 polysaccharide export protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: Polysaccharide biosynthesis/export protein.
  
  
 0.852
AFZ45838.1
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cyp:PCC8801_0906 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Methyltransferase domain family.
 
  
 0.721
AFZ42451.1
Hypothetical protein; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; COGs: COG1040 amidophosphoribosyltransferase; KEGG: npu:Npun_F0271 hypothetical protein; SPTR: Putative uncharacterized protein.
   
    0.686
AFZ45406.1
PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2; Tetratricopeptide repeat; COGs: COG1216 glycosyltransferase; InterPro IPR019734:IPR013026:IPR001440:IPR001173; KEGG: mst:Msp_0492 glycosyltransferase; PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative glycosyltransferase.
 
 
 0.597
AFZ45834.1
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; KEGG: cyc:PCC7424_0018 glycosyl transferase; SPTR: Putative uncharacterized protein.
 
  
 0.555
AFZ45038.1
PFAM: DnaJ domain; InterPro IPR001623; KEGG: cyh:Cyan8802_3165 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SPTR: Heat shock protein DnaJ, N-terminal.
   
    0.495
AFZ43737.1
PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: cyh:Cyan8802_2744 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
     
 0.478
AFZ45080.1
PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR017871:IPR000644:IPR003018:IPR 003661:IPR003594:IPR001789:IPR008207:IPR000014:IPR005467:I PR000700; KEGG: npu:Npun_F2363 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CBS domain containing protein; GAF domain protein; response regulator receiv [...]
  
  
 0.442
AFZ43435.1
PFAM: Glycosyl transferases group 1; Tetratricopeptide repeat; COGs: COG0438 Glycosyltransferase; InterPro IPR019734:IPR013026:IPR001440:IPR001296; KEGG: ter:Tery_0122 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Glycosyl transferase, group 1.
 
 
 0.437
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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