STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ45956.1Fructosamine/Ketosamine-3-kinase; PFAM: Fructosamine kinase; COGs: COG3001 conserved hypothetical protein; InterPro IPR016477; KEGG: cyc:PCC7424_3612 fructosamine kinase; PFAM: Fructosamine/Ketosamine-3-kinase; SPTR: Fructosamine kinase. (289 aa)    
Predicted Functional Partners:
AFZ44381.1
PFAM: Low molecular weight phosphotyrosine protein phosphatase; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867:IPR000106; KEGG: syp:SYNPCC7002_A0973 low molecular weight phosphotyrosine protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Low molecular weight phosphotyrosine protein phosphatase.
 
     0.679
AFZ45957.1
Photosystem q(b) protein; PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosystem II, DI subunit (also called Q(B)); InterPro IPR005867:IPR000484; KEGG: syp:SYNPCC7002_A0157 photosystem II D1 subunit PsbA-II (Qb protein); PFAM: photosynthetic reaction centre protein; SPTR: Photosystem Q(B) protein 1; TIGRFAM: photosystem q(b) protein.
       0.551
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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