Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK78208.1Predicted lipase, GDSL-type; Signal peptide. (202 aa)    
Predicted Functional Partners:
CCK80823.1
ABC transporter, permease protein.
 
 
   0.880
CCK78207.1
Predicted nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
     
 0.662
CCK78209.1
Predicted metal-binding protein; DUF2284.
       0.527
CCK78246.1
Conserved uncharacterized protein.
  
 
 0.500
CCK79580.1
Uncharacterized protein.
  
 
 0.500
CCK80458.1
Uncharacterized protein; Signal peptide.
  
 
 0.500
CCK80945.1
Putative Large exoprotein containing haemagglutination activity domain; Signal peptide.
  
 
 0.500
CCK80949.1
Filamentous harmagglutinin family outer membrane protein.
  
 
 0.500
CCK81816.1
Uncharacterized protein, putative surface association.
   
 
 0.493
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
  
 0.478
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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