Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK78222.1Putative methyltransferase. (200 aa)    
Predicted Functional Partners:
CCK82061.1
Conserved uncharacterized protein, UPF0066.
 
   
 0.609
CCK78223.1
Preditced transcriptional regulator, AraC family.
     
 0.485
bioB
BioB: biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.484
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
   
 
 0.463
CCK81323.1
Methyltransferase, type 11.
  
     0.450
CCK81829.1
Amino acid adenylation domain protein.
     
 0.438
ispA
IspA: geranyltranstransferase (Farnesyl-diphosphate synthase); Belongs to the FPP/GGPP synthase family.
  
 
 0.415
ispB
IspB: octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.414
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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