Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK78223.1Preditced transcriptional regulator, AraC family. (322 aa)    
Predicted Functional Partners:
rpoA
RpoA: DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.681
CCK81464.1
TonB-dependent receptor, fragment.
  
   
 0.657
CCK81467.1
TonB-dependent receptor, related to iron transport; Signal peptide.
  
   
 0.647
CCK81454.1
TonB-dependent receptor, related to iron transport.
  
   
 0.644
CCK78220.1
TonB-dependent receptor.
  
   
 0.639
CCK78367.1
Putative transcriptional regulator, AraC type; Contains ThiJ/PfpI domain.
 
 
 0.597
CCK81468.1
TonB-dependent receptor, related to iron transport.
  
   
 0.587
CCK81829.1
Amino acid adenylation domain protein.
 
  
 0.587
CCK82341.1
TonB-dependent receptor; Signal peptide.
  
   
 0.583
CCK79085.1
Predicted TonB-dependent receptor.
  
   
 0.578
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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