Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK78246.1Conserved uncharacterized protein. (564 aa)    
Predicted Functional Partners:
CCK78245.1
GTP-binding protein, HSR1-related.
 
   
 0.959
CCK81473.1
Conserved uncharacterized protein.
  
     0.598
CCK80825.1
GDSL-like lipase/acylhydrolase; Signal peptide.
 
 
 0.573
CCK79569.1
Conserved uncharacterized protein; Signal peptide.
  
    0.565
CCK81137.1
Conserved uncharacterized protein.
  
     0.545
CCK79631.1
Conserved uncharacterized protein.
  
   
 0.512
CCK78208.1
Predicted lipase, GDSL-type; Signal peptide.
  
 
 0.500
CCK81789.1
Predicted polyketide synthase.
 
 
 
 0.486
CCK81282.1
Conserved uncharacterized protein.
  
     0.469
CCK78912.1
Conserved uncharacterized protein.
  
    0.446
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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