STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctMDctM: TRAP C4-dicarboxylate transport system permease; Signal peptide. (440 aa)    
Predicted Functional Partners:
dctQ
DctQ: TRAP transporter DctQ subunit.
  
 0.966
dctP
DctP: TRAP dicarboxylate transporter periplasmic binding protein, DctP subunit.
 
  
 0.943
dctQ5
DctQ5: TRAP dicarboxylate transporter, presursor; Signal anchor.
  
 0.900
dctP5
DctP5: TRAP dicarboxylate transporter periplasmic binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.800
dctP2
DctP2: TRAP dicarboxylate transporter periplasmic binding protein; Signal peptide.
 
   
 0.782
dctP6
DctP6: predicted TRAP dicarboxylate transporter periplasmic binding protein; Signal peptide.
 
   
 0.782
dctQ6
DctQ6: TRAP dicarboxylate transporter, presursor.
 
  
 0.766
dctP4
DctP4: TRAP dicarboxylate transporter periplasmic binding protein; Signal peptide.
 
   
 0.737
dctP8
DctP8: predicted TRAP dicarboxylate transporter periplasmic binding protein; Signal peptide.
 
   
 0.722
dctP7
DctP7: predicted TRAP dicarboxylate transporter periplasmic binding protein; Signal peptide.
 
   
 0.708
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.