STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dctQDctQ: TRAP transporter DctQ subunit. (169 aa)    
Predicted Functional Partners:
dctM
DctM: TRAP C4-dicarboxylate transport system permease; Signal peptide.
  
 0.964
dctP
DctP: TRAP dicarboxylate transporter periplasmic binding protein, DctP subunit.
 
  
 0.936
dctQ9
DctQ9: TRAP dicarboxylate transporter.
  
 
  0.929
dctQ5
DctQ5: TRAP dicarboxylate transporter, presursor; Signal anchor.
  
  
 
0.926
dctQ6
DctQ6: TRAP dicarboxylate transporter, presursor.
  
  
 
0.920
dctQM2
DctQM2: TRAP dicarboxylate transporter, Q and M fusion protein.
 
 
 
0.919
dctQ4
DctQ4: TRAP dicarboxylate transporter, presursor; Signal anchor.
  
 
  0.913
dctQ7
DctQ7: putative TRAP dicarboxylate transporter; Signal peptide.
  
 
 
0.913
dctQ3
DctQ3: TRAP dicarboxylate transporter; Signal anchor.
  
 
 
0.905
dctM5
DctM5: TRAP dicarboxylate transport system permease; Signal peptide.
  
 0.783
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.