Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
bssEBssE: chaperone associated with benzylsuccinate synthase. (297 aa)    
Predicted Functional Partners:
bssF
BssF: conserved uncharacterized protein.
  
 
 0.875
bssA
BssA: benzylsuccinate synthase, alpha subunit.
 
   
 0.786
bbsA2
BbsA2: benzylsuccinyl-CoA thiolase, subunit A.
  
     0.757
bbsA
BbsA: benzylsuccinyl-CoA thiolase, subunit A.
  
     0.757
bhsA
BhsA: hydroxybenzylsuccinyl-CoA thiolase, subunit A.
  
     0.748
bssG2
BssG2: conserved uncharacterized protein associated with anaerobic toluene degradation gene cluster.
  
     0.727
hbsF
HbsF: conserved uncharacterized protein.
  
 
 0.660
CCK78909.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; Signal peptide.
  
  
 0.562
CCK78671.1
Conserved uncharacterized protein associated with anaerobic toluene degradation gene cluster.
 
   
 0.555
bbsB
BbsB: benzylsuccinyl-CoA thiolase, subunit B; Belongs to the thiolase-like superfamily. Thiolase family.
  
   
 0.554
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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