STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK78385.1Transcriptional regulator, TetR family. (219 aa)    
Predicted Functional Partners:
CCK78384.1
Uncharacterized protein.
     
 0.777
CCK81948.1
Transcriptional regulator, TetR family.
  
     0.590
CCK81789.1
Predicted polyketide synthase.
     
 0.524
CCK79055.1
Conserved uncharacterized protein.
  
     0.513
pth
Pth: peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.438
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
     
 0.431
CCK78386.1
Putative RNA pseudouridine synthase.
       0.418
CCK81829.1
Amino acid adenylation domain protein.
     
 0.416
CCK80588.1
CoA-substrate-specific enzyme activase, related to BcrA/D.
 
   
 0.414
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.