STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK78414.1Putative aminotransferase. (380 aa)    
Predicted Functional Partners:
cysK
CysK: cysteine synthase (O-acetylserine sulfhydrylase).
    
 0.924
aspC
AspC: predicted aspartate aminotransferase.
 
  
0.916
CCK80999.1
Predicted dihydropteroate synthase.
     
 0.904
CCK80355.1
Conserved uncharacterized protein, DUF39.
     
 0.901
CCK80272.1
Predicted 4Fe-4S ferredoxin.
    
  0.900
ahcY
AhcY: adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
  0.900
tst
Tst: predicted thiosulfate sulfurtransferase; Signal peptide.
     
 0.900
hom
Hom: homoserine dehydrogenase.
    
 0.824
coaBC
Coenzyme A biosynthesis bifunctional protein CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
    
  0.806
pepN
PepN: membrane alanyl aminopeptidase (aminopeptidase N).
    
  0.802
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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