Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
rrxRrx: rubredoxin; Belongs to the rubredoxin family. (59 aa)    
Predicted Functional Partners:
dfx
Dfx: desulfoferredoxin.
 
  
 0.789
roo
Roo: rubredoxin-oxygen oxidoreductase.
 
  
 0.735
CCK78419.1
Rhodanese and rubrerythrin domain protei.
  
  
 0.665
CCK78532.1
Sulfite reductase, assimilatory type; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.664
CCK78907.1
Nitrite and sulfite reductase 4Fe-4S region protein.
  
 
 0.664
CCK81123.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.664
CCK81966.1
FAD-dependent pyridine nucleotidedisulfide oxidoreductase associated with CO dehydrogenase.
  
 
 0.664
padH2
PadH2: phenylglyoxylate:acceptor oxidoreductase, subunit H.
  
 
 0.664
hysA
HysA: periplasmic [NiFeSe] hydrogenase, small subunit.
  
 
 0.624
CCK78416.1
Conserved uncharacterized protein.
  
  
 0.543
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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