Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rbr2Rbr2: rubrerythrin. (191 aa)    
Predicted Functional Partners:
CCK78422.1
Uncharacterized protein.
       0.743
dfx
Dfx: desulfoferredoxin.
 
  
 0.722
CCK78424.1
Uncharacterized protein.
  
  
 0.637
roo
Roo: rubredoxin-oxygen oxidoreductase.
 
  
 0.580
CCK78421.1
Putative mercuric reductase (Hg(II) reductase); Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
       0.562
CCK78419.1
Rhodanese and rubrerythrin domain protei.
  
  
 0.538
rrx
Rrx: rubredoxin; Belongs to the rubredoxin family.
  
  
 0.527
prxU
PrxU: selenocysteine-containing peroxiredoxin.
  
  
 0.517
CCK78420.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
     
 0.471
rrx2
Rrx2: predicted rubredoxin associated with rubredoxin-oxygen oxidoreductase Roo.
 
  
 0.471
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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